Publications

Recent Manuscripts and Chapters

Maloy S. 2024. Cold Spring Harbor Laboratory courses on phage and bacterial genetics: Catalysts for innovation in molecular biology, genetics, and microbiology. Cold Spring Harbor Protocols. DOI: 10.1101/pbd.over108378

Maloy S. 2021. Climate change and microbes. In T. Letcher (ed.), The Impacts of Climate Change: Comprehensive Study of the Physical, Societal and Political Issues. Elsevier, Oxford UK. DOI: 10.1016/B978-0-12-822373-4.00022-7

Maloy S, Pucher C, Sedam M, Womack C, Baxter S. 2020. Opening doors for diverse talent in biotechnology. Nature Biotechnology 38: 1099-1104. DOI: 10.1038/s41587-020-0663-4

Schloss P, Junior M, Alvania R, Arias C, Bäumler A, Casadevall A, Detweiler C, Drake H, Gilbert J, Imperiale M, Lovett S, Maloy S, McAdam A, Newton I, Sadowsky M, Rozanne Sandri-Goldin R, Thomas Silhavy T, Tontonoz P, Young J, Cameron C, Cann I, AO, Kozik AJ. 2020. The ASM Journals Committee Values the Contributions of Black Microbiologists. mBio 11(4): e01998-20 DOI: 10.1128/mBio.01998-20 [Simultaneously publication by all ASM journals.]

Hughes K, Maloy S. 2019. In memorial: Bob Simons. Mol Microbiol 112: 333-334. DOI: 10.1111/mmi.14333

Casas V, Maloy S. 2018. The role of phage in the adaptation of bacteria to new environmental niches. In Grand Challenges in Biology and Biotechnology: Molecular Mechanisms of Microbial Evolution , pp. 287-306. Springer Nature, Switzerland.

Maloy S, Moran MA, Mulholland M, Sosik H, Spear J. 2017. Microbes and Climate Change, American Academy for Microbiology and American Geophysical Union, Washington, DC. <https://www.ncbi.nlm.nih.gov/books/NBK513763/>

Matthews TD, Schmieder R, Silva G, Busch J, Cassman N, Doherty M, Green D, Matlock B, Heffernan B, Olsen G, Farris Hanna L, Schifferli D, Maloy S, Dinsdale E, Edwards R. 2015. Genomic comparison of the closely-related Salmonella enterica serovars Enteritidis, Dublin, and Gallinarum. PLoS One, DOI: 10.1371/journal.pone.0126883

Silva C, Calva E, Maloy S. 2014. One Health and food-borne disease: Salmonella transmission between humans, animals, and plants. Microbiol. Spectrum 2; doi:10.1128/microbiolspec.OH-0020-2013

Casas V, Maloy S. 2014. Genomic and metagenomic approaches for predicting pathogen evolution. Microbiol. Spectrum 2; doi:10.1128/microbiolspec.OH-0019-201399.

Atlas R, Maloy S. 2014. The future of One Health. Microbiol. Spectrum 2; doi:10.1128/microbiolspec.OH-0018-2012

Kolter R, Maloy S. 2012. Darwin and Microbiology. In Kolter R and Maloy S (eds.), Microbes and Evolution: The World that Darwin Never Saw. ASM Press, Washington DC.

Maloy S, Mora G. 2012. Unnecessary baggage. In Kolter R and Maloy S (eds.). Microbes and Evolution: The World that Darwin Never Saw. ASM Press, Washington DC.

Maloy S. 2012. Bacterial genetics. In A Levin (ed.), Encyclopedia of Biodiversity, 2^nd Edition. Elsevier, Oxford.

Casas V, Maloy S. 2011. Role of bacteriophage-encoded exotoxins in the evolution of bacterial pathogens. Future Microbiol. 6: 1461-1473.

Casas V, Sobrepeña G, Magbanua J, Maloy S. 2011. Bacteriophage-encoded Shiga toxin gene in atypical bacterial host. Gut Pathogens 3: 10 DOI:10.1186/1757-4749-3-10

Matthews T, Rapsch W, Maloy S. 2011. Chromosomal rearrangements in Salmonella enterica sv. Typhi strains isolated from asymptomatic human carriers. Mbio 2: e0060-11. <https://journals.asm.org/doi/full/10.1128/mBio.00060-11?rfr_dat=cr_pub++0pubmed&url_ver=Z39.88-2003&rfr_id=ori%3Arid%3Acrossref.org>

Kolter R, Maloy S. 2011. Microbiology and Darwin. Microbe 6: 26-29.

Matthews T, Maloy S. 2011. Genome rearrangements in Salmonella. In P Fratamico, Y Liu, and S Kathari (ed.), Genomes of Foodborne Pathogens, pp. 41-66. ASM Press, Washington, DC.

Maloy S, Handlesman J, Singh S. 2011. Dynamics of host-associated microbial communities. Microbe 6: 21-25.

Casas V, Magbanua J, Sobrepeña G, Kelley S, Maloy S. 2010. Reservoir of bacterial exotoxin genes in the environment. Intl J Microbiol. DOI: 10:1155/2010/754368.

Matthews T, Edwards R, Maloy S 2010. Chromosomal rearrangements formed by rrn recombination do not improve replichore balance in host-specific Salmonella enterica serovars, PLoS ONE, October 19 DOI: 10.1371/journal.pone.0013503

Matthews T, Maloy S. 2010. Fitness effects of replichore imbalance in Salmonella enterica. J Bacteriol. 192: 6086-6088.

Atlas, R, Rubin C, Maloy S, Daszak P, Colwell R, Hyde B. 2010. Predicting and preventing the next pandemic. Microbe 5: 383-389.

Maloy S. 2010. Genetic regulation by compartmentalization: The put operon. In Maloy S, Hughes K, J Casadesus (eds.), The Lure of Bacterial Genetics. ASM Press, Washington DC.

Maloy S, Hughes K. 2010. Phage and bacterial genetics at Cold Spring Harbor Laboratory. In Maloy S, Hughes K, J Casadesus (eds.), The Lure of Bacterial Genetics. ASM Press, Washington DC.

Hughes K, Maloy S. 2010. Paths and pathways. In Maloy S, Hughes K, J Casadesus (eds.), The Lure of Bacterial Genetics. ASM Press, Washington DC.

Tsuji S, Naili I, Authement N, Hernandez V, Hancock B, Giacalone M, Segall S, Maloy S. 2010. An efficient thermo-inducible bacterial suicide system: Application for elimination of viable parental bacteria from minicells. Bioprocess Internatl. 8: 28-40

Books [see Amazon page]

Maloy S, Lodge J, Imperiale M. 2024. Scientific Integrity, 5th Edition. ASM Press/Wiley Publishers. [In Preparation]

Maloy S, Hughes K. 2024. Editors-in-Chief, Brenner’s Encyclopedia of Genetics 3^nd Edition, Elsevier, Oxford, UK. [In Preparation]

Schmidt T, Mobley H, McCormick B, Kogure K, Thompson F, Hunter J, Maloy S, Haselkorn R, Smalla K, Petros-Allo C. (eds). 2019. Encyclopedia of Microbiology. Academic Press.

Maloy S, Hughes K. 2017. Reference Module in Biomedical Sciences (editors), Elsevier, Oxford, UK.

Atlas R, Maloy S. 2014. One Health: People, Animals, and Environment. ASM Press, Washington DC.

Cossart P, Maloy S. 2014. Host-Pathogen Interactions. Cold Spring Harbor Laboratory Press, NY.

Maloy S, Hughes K. 2013. Brenner’s Encyclopedia of Genetics 2^nd ed. (7 volumes), Editors-in-Chief, Elsevier, Oxford, UK.

Kolter R, Maloy S. 2012. Microbes and Evolution: The World that Darwin Never Saw. ASM Press, Washington DC.

Maloy S, Hughes K, Casadesus J. 2010. The Lure of Bacterial Genetics. ASM Press, Washington DC.

Hughes K, Maloy S (Editors). 2007. Methods Enzymol, Advanced Bacterial Genetics, Elsevier Press, St. Louis.

Maloy S, Stewart V, Taylor R. 1996. Genetic Analysis of Pathogenic Bacteria. Cold Spring Harbor Laboratory Press, NY.

Maloy S, Cronan J, Freifelder D. 1994. Microbial Genetics, Second Edition. Jones & Bartlett Publishers, MA.

Maloy S. 1989. Experimental Techniques in Bacterial Genetics. Jones & Bartlett Publishers, MA.